No. words: 1606; after pruning: 1580


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.3 (1,1:753)  705  0.00 0.13 0.13  BE399500Ta11P137A02P067B071F1_079.ab1        1   754 (43)  C BE399500Ta11P137A02P067B071R1_079.ab1   (55)   754     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  372 nodes

 188 str. conn. components

Path
    1  C BE399500Ta11P137A02P067B071R1_079.ab1   809 
   66    BE399500Ta11P137A02P067B071F1_079.ab1    10 
  578  C BE399500Ta11P137A02P067B071R1_079.ab1   232 
  582    BE399500Ta11P137A02P067B071F1_079.ab1   526 
  590  C BE399500Ta11P137A02P067B071R1_079.ab1   220 
  594    BE399500Ta11P137A02P067B071F1_079.ab1   538 
  606  C BE399500Ta11P137A02P067B071R1_079.ab1   204 
  714    BE399500Ta11P137A02P067B071F1_079.ab1   658 
  722  C BE399500Ta11P137A02P067B071R1_079.ab1    88 
  766    BE399500Ta11P137A02P067B071F1_079.ab1   710 
  770  C BE399500Ta11P137A02P067B071R1_079.ab1    40 
  802    BE399500Ta11P137A02P067B071F1_079.ab1   747 
Contig length: old 852, new 852

Contig length: old 852, new 853
New start: 0 
I Change at: 798; seg lengths: entry 1, contig 0