No. words: 1565; after pruning: 1539


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.7 (1,1:766)  722  0.00 0.13 0.00  BE399500Ta12P137A02P067B071F1_080.ab1        4   767 (33)  C BE399500Ta12P137A02P067B071R1_080.ab1   (0)   765     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  380 nodes

 192 str. conn. components

Path
    1    BE399500Ta12P137A02P067B071F1_080.ab1     1 
    7  C BE399500Ta12P137A02P067B071R1_080.ab1   762 
   11    BE399500Ta12P137A02P067B071F1_080.ab1    11 
   15  C BE399500Ta12P137A02P067B071R1_080.ab1   754 
   26    BE399500Ta12P137A02P067B071F1_080.ab1    25 
  522  C BE399500Ta12P137A02P067B071R1_080.ab1   247 
  526    BE399500Ta12P137A02P067B071F1_080.ab1   525 
  538  C BE399500Ta12P137A02P067B071R1_080.ab1   231 
  558    BE399500Ta12P137A02P067B071F1_080.ab1   557 
  566  C BE399500Ta12P137A02P067B071R1_080.ab1   203 
  758    BE399500Ta12P137A02P067B071F1_080.ab1   757 
Contig length: old 800, new 801

Contig length: old 801, new 801
New start: 0