No. words: 1567; after pruning: 1541


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.0 (1,1:766)  727  0.00 0.00 0.00  BE399500Ta18P137A02P067B071F1_074.ab1        3   767 (35)  C BE399500Ta18P137A02P067B071R1_074.ab1   (0)   765     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  384 nodes

 194 str. conn. components

Path
    1    BE399500Ta18P137A02P067B071F1_074.ab1     1 
    6  C BE399500Ta18P137A02P067B071R1_074.ab1   762 
   10    BE399500Ta18P137A02P067B071F1_074.ab1    10 
   90  C BE399500Ta18P137A02P067B071R1_074.ab1   678 
   94    BE399500Ta18P137A02P067B071F1_074.ab1    94 
  182  C BE399500Ta18P137A02P067B071R1_074.ab1   586 
  186    BE399500Ta18P137A02P067B071F1_074.ab1   186 
  358  C BE399500Ta18P137A02P067B071R1_074.ab1   410 
  366    BE399500Ta18P137A02P067B071F1_074.ab1   366 
  422  C BE399500Ta18P137A02P067B071R1_074.ab1   346 
  450    BE399500Ta18P137A02P067B071F1_074.ab1   450 
  458  C BE399500Ta18P137A02P067B071R1_074.ab1   310 
  462    BE399500Ta18P137A02P067B071F1_074.ab1   462 
  474  C BE399500Ta18P137A02P067B071R1_074.ab1   294 
  498    BE399500Ta18P137A02P067B071F1_074.ab1   498 
  506  C BE399500Ta18P137A02P067B071R1_074.ab1   262 
  510    BE399500Ta18P137A02P067B071F1_074.ab1   510 
  518  C BE399500Ta18P137A02P067B071R1_074.ab1   250 
  530    BE399500Ta18P137A02P067B071F1_074.ab1   530 
  534  C BE399500Ta18P137A02P067B071R1_074.ab1   234 
  546    BE399500Ta18P137A02P067B071F1_074.ab1   546 
  550  C BE399500Ta18P137A02P067B071R1_074.ab1   218 
  754    BE399500Ta18P137A02P067B071F1_074.ab1   754 
Contig length: old 802, new 802

Contig length: old 802, new 802
New start: 0