No. words: 1397; after pruning: 1371


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.0 (1,1:730)  606  1.05 0.00 0.15  BE399500Ta21P137A02P067B071F1_069.ab1       52   717 (0)  C BE399500Ta21P137A02P067B071R1_069.ab1   (0)   680    16 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  318 nodes

 161 str. conn. components

Path
    1    BE399500Ta21P137A02P067B071F1_069.ab1     1 
   79  C BE399500Ta21P137A02P067B071R1_069.ab1   653 
   83    BE399500Ta21P137A02P067B071F1_069.ab1    83 
  213  C BE399500Ta21P137A02P067B071R1_069.ab1   519 
  217    BE399500Ta21P137A02P067B071F1_069.ab1   217 
  229  C BE399500Ta21P137A02P067B071R1_069.ab1   503 
  233    BE399500Ta21P137A02P067B071F1_069.ab1   233 
  277  C BE399500Ta21P137A02P067B071R1_069.ab1   455 
  281    BE399500Ta21P137A02P067B071F1_069.ab1   281 
  293  C BE399500Ta21P137A02P067B071R1_069.ab1   439 
  297    BE399500Ta21P137A02P067B071F1_069.ab1   297 
  321  C BE399500Ta21P137A02P067B071R1_069.ab1   411 
  333    BE399500Ta21P137A02P067B071F1_069.ab1   333 
  385  C BE399500Ta21P137A02P067B071R1_069.ab1   347 
  389    BE399500Ta21P137A02P067B071F1_069.ab1   389 
  429  C BE399500Ta21P137A02P067B071R1_069.ab1   303 
  437    BE399500Ta21P137A02P067B071F1_069.ab1   437 
  477  C BE399500Ta21P137A02P067B071R1_069.ab1   255 
  481    BE399500Ta21P137A02P067B071F1_069.ab1   481 
  493  C BE399500Ta21P137A02P067B071R1_069.ab1   239 
  497    BE399500Ta21P137A02P067B071F1_069.ab1   497 
  505  C BE399500Ta21P137A02P067B071R1_069.ab1   227 
  509    BE399500Ta21P137A02P067B071F1_069.ab1   509 
  525  C BE399500Ta21P137A02P067B071R1_069.ab1   207 
  533    BE399500Ta21P137A02P067B071F1_069.ab1   533 
  565  C BE399500Ta21P137A02P067B071R1_069.ab1   167 
  577    BE399500Ta21P137A02P067B071F1_069.ab1   577 
  581  C BE399500Ta21P137A02P067B071R1_069.ab1   151 
  593    BE399500Ta21P137A02P067B071F1_069.ab1   593 
  597  C BE399500Ta21P137A02P067B071R1_069.ab1   135 
  601    BE399500Ta21P137A02P067B071F1_069.ab1   601 
  605  C BE399500Ta21P137A02P067B071R1_069.ab1   127 
  629    BE399500Ta21P137A02P067B071F1_069.ab1   629 
  637  C BE399500Ta21P137A02P067B071R1_069.ab1    95 
  657    BE399500Ta21P137A02P067B071F1_069.ab1   657 
  674  C BE399500Ta21P137A02P067B071R1_069.ab1    58 
Contig length: old 731, new 731

Contig length: old 731, new 732
New start: 0 
I Change at: 705; seg lengths: entry 1, contig 0
S Change at: 709; seg lengths: entry 4, contig 4