No. words: 1614; after pruning: 1588


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.0 (1,1:774)  730  0.13 0.13 0.00  BE399500Ta22P137A02P067B071F1_070.ab1        1   775 (37)  C BE399500Ta22P137A02P067B071R1_070.ab1   (26)   776     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  384 nodes

 194 str. conn. components

Path
    1  C BE399500Ta22P137A02P067B071R1_070.ab1   802 
   30    BE399500Ta22P137A02P067B071F1_070.ab1     4 
   39  C BE399500Ta22P137A02P067B071R1_070.ab1   763 
   43    BE399500Ta22P137A02P067B071F1_070.ab1    17 
  555  C BE399500Ta22P137A02P067B071R1_070.ab1   247 
  563    BE399500Ta22P137A02P067B071F1_070.ab1   537 
  567  C BE399500Ta22P137A02P067B071R1_070.ab1   235 
  595    BE399500Ta22P137A02P067B071F1_070.ab1   569 
  599  C BE399500Ta22P137A02P067B071R1_070.ab1   203 
  755    BE399500Ta22P137A02P067B071F1_070.ab1   729 
  763  C BE399500Ta22P137A02P067B071R1_070.ab1    39 
  791    BE399500Ta22P137A02P067B071F1_070.ab1   765 
Contig length: old 839, new 838

Contig length: old 838, new 838
New start: 0