No. words: 1163; after pruning: 1137


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.8 (1,1:866)  273  0.34 0.34 0.00  BE399500Tu01P067B01P067B071F1_003.ab1      309   603 (0)  C BE399500Tu01P067B01P067B071R1_003.ab1   (0)   560   265 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  142 nodes

 73 str. conn. components

Path
    1    BE399500Tu01P067B01P067B071F1_003.ab1     1 
  444  C BE399500Tu01P067B01P067B071R1_003.ab1   425 
  448    BE399500Tu01P067B01P067B071F1_003.ab1   448 
  456  C BE399500Tu01P067B01P067B071R1_003.ab1   413 
  468    BE399500Tu01P067B01P067B071F1_003.ab1   468 
  476  C BE399500Tu01P067B01P067B071R1_003.ab1   393 
  512    BE399500Tu01P067B01P067B071F1_003.ab1   512 
  524  C BE399500Tu01P067B01P067B071R1_003.ab1   345 
Contig length: old 867, new 868

Contig length: old 868, new 868
New start: 0