No. words: 1148; after pruning: 1108


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.0 (1,1:857)  267  0.69 0.35 0.00  BE399500Tu02P067B01P067B071F1_001.ab1      301   589 (0)  C BE399500Tu02P067B01P067B071R1_001.ab1   (0)   559   270 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  134 nodes

 69 str. conn. components

Path
    1    BE399500Tu02P067B01P067B071F1_001.ab1     1 
  436  C BE399500Tu02P067B01P067B071R1_001.ab1   424 
  440    BE399500Tu02P067B01P067B071F1_001.ab1   440 
  444  C BE399500Tu02P067B01P067B071R1_001.ab1   416 
Contig length: old 858, new 859

Contig length: old 859, new 859
New start: 0