No. words: 3052; after pruning: 3000


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    
Merge:(0)    4    0.0 5.9 (1,1:705)  611  2.85 0.00 0.14  BE399869Ld03P027G06P027G121F1_078.ab1        5   706 (21)  C BE399869Ld03P027G06P027G121R1_076.ab1   (73)   701     1 *

Pass: 1
#reads  #contigs (not counting singlets)
    1      2
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.7 (2,1:-5)  653  0.98 0.14 0.14  BE399869Ld03P027G06P027G121R1_076.ab1        1   711 (63)  C BE399869Ld03P027G06P027G121F1_076.ab1   (59)   711     1 *
Merge:(0)    0   -1.1 6.4 (3,1:707)  682  2.71 0.13 0.00  BE399869Ld03P027G06P027G121R1_076.ab1        1   774 (0)    BE399869Ld03P027G06P027G121R1_078.ab1        2   776 (5) *

Pass: 3
#reads  #contigs (not counting singlets)
    4      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0
-1.1       1        0

Gap   # merges  # failures
 size
 0       2        0

Offset
  0       3 
  1       2 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    4      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    4    1

Chimera merges: 


Contig 1:  1808 nodes

 430 str. conn. components

Path
    1  C BE399869Ld03P027G06P027G121R1_078.ab1   781 
   20  C BE399869Ld03P027G06P027G121R1_076.ab1   760 
   24  C BE399869Ld03P027G06P027G121R1_078.ab1   758 
   32  C BE399869Ld03P027G06P027G121R1_076.ab1   748 
   44  C BE399869Ld03P027G06P027G121R1_078.ab1   738 
   78  C BE399869Ld03P027G06P027G121R1_076.ab1   702 
   86    BE399869Ld03P027G06P027G121F1_076.ab1    17 
   94    BE399869Ld03P027G06P027G121F1_078.ab1    20 
  102    BE399869Ld03P027G06P027G121F1_076.ab1    33 
  166    BE399869Ld03P027G06P027G121F1_078.ab1    92 
  170    BE399869Ld03P027G06P027G121F1_076.ab1   101 
  190    BE399869Ld03P027G06P027G121F1_078.ab1   116 
  198    BE399869Ld03P027G06P027G121F1_076.ab1   129 
  246    BE399869Ld03P027G06P027G121F1_078.ab1   172 
  248    BE399869Ld03P027G06P027G121F1_076.ab1   179 
  322    BE399869Ld03P027G06P027G121F1_078.ab1   248 
  330    BE399869Ld03P027G06P027G121F1_076.ab1   261 
  365    BE399869Ld03P027G06P027G121F1_078.ab1   291 
  377    BE399869Ld03P027G06P027G121F1_076.ab1   308 
  397    BE399869Ld03P027G06P027G121F1_078.ab1   323 
  402    BE399869Ld03P027G06P027G121F1_076.ab1   333 
  434    BE399869Ld03P027G06P027G121F1_078.ab1   360 
  458    BE399869Ld03P027G06P027G121F1_076.ab1   389 
  502    BE399869Ld03P027G06P027G121F1_078.ab1   428 
  510    BE399869Ld03P027G06P027G121F1_076.ab1   441 
  522    BE399869Ld03P027G06P027G121F1_078.ab1   448 
  524    BE399869Ld03P027G06P027G121F1_076.ab1   455 
  528    BE399869Ld03P027G06P027G121F1_078.ab1   454 
  532    BE399869Ld03P027G06P027G121F1_076.ab1   463 
  538    BE399869Ld03P027G06P027G121F1_078.ab1   464 
  550    BE399869Ld03P027G06P027G121F1_076.ab1   481 
  557  C BE399869Ld03P027G06P027G121R1_078.ab1   225 
  629  C BE399869Ld03P027G06P027G121R1_076.ab1   151 
  717  C BE399869Ld03P027G06P027G121R1_078.ab1    65 
  733  C BE399869Ld03P027G06P027G121R1_076.ab1    47 
  741  C BE399869Ld03P027G06P027G121R1_078.ab1    41 
  777    BE399869Ld03P027G06P027G121F1_076.ab1   708 
Contig length: old 838, new 839

Contig length: old 839, new 839
New start: 0