No. words: 1476; after pruning: 1450


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 13.1 (1,1:698)  659  0.14 0.00 0.29  BE399869Tu02P027G06P027G121F1_029.ab1        1   698 (31)  C BE399869Tu02P027G06P027G121R1_029.ab1   (49)   698     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  340 nodes

 172 str. conn. components

Path
    1  C BE399869Tu02P027G06P027G121R1_029.ab1   747 
   58    BE399869Tu02P027G06P027G121F1_029.ab1     9 
  154  C BE399869Tu02P027G06P027G121R1_029.ab1   594 
  158    BE399869Tu02P027G06P027G121F1_029.ab1   109 
  523  C BE399869Tu02P027G06P027G121R1_029.ab1   225 
  719    BE399869Tu02P027G06P027G121F1_029.ab1   670 
Contig length: old 777, new 778

Contig length: old 778, new 778
New start: 0