No. words: 600; after pruning: 574


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.2 (1,1:248)  154  4.35 0.00 0.54  BE403201Sn30P088E01P052D121F1_023.ab1        1   184 (0)  C BE403201Sn30P088E01P052D121R1_023.ab1   (168)   248    66 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  70 nodes

 37 str. conn. components

Path
    1  C BE403201Sn30P088E01P052D121R1_023.ab1   416 
  226    BE403201Sn30P088E01P052D121F1_023.ab1    59 
  230  C BE403201Sn30P088E01P052D121R1_023.ab1   187 
  267    BE403201Sn30P088E01P052D121F1_023.ab1   100 
  276  C BE403201Sn30P088E01P052D121R1_023.ab1   141 
  294    BE403201Sn30P088E01P052D121F1_023.ab1   127 
  309  C BE403201Sn30P088E01P052D121R1_023.ab1   108 
  331    BE403201Sn30P088E01P052D121F1_023.ab1   164 
  335  C BE403201Sn30P088E01P052D121R1_023.ab1    82 
Contig length: old 416, new 416

Contig length: old 416, new 416
New start: 0