No. words: 639; after pruning: 613


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    1   -0.7 -0.7 (1,1:383)  111  5.88 0.00 0.00  BE403201Ta13P088E01P052D121F1_013.ab1        1   136 (1)  C BE403201Ta13P088E01P052D121R1_013.ab1   (118)   384   249 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.7       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  46 nodes

 25 str. conn. components

Path
    1  C BE403201Ta13P088E01P052D121R1_013.ab1   502 
Contig length: old 502, new 502

Contig length: old 502, new 502
New start: 0