No. words: 1087; after pruning: 1061


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.1 (1,1:366)  356  0.54 0.00 0.27  BE403428Ld07P129B01P129B071F1_090.ab1        1   367 (198)  C BE403428Ld07P129B01P129B071R1_090.ab1   (156)   366     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  176 nodes

 90 str. conn. components

Path
    1  C BE403428Ld07P129B01P129B071R1_090.ab1   522 
  180    BE403428Ld07P129B01P129B071F1_090.ab1    24 
  184  C BE403428Ld07P129B01P129B071R1_090.ab1   339 
  197    BE403428Ld07P129B01P129B071F1_090.ab1    41 
  205  C BE403428Ld07P129B01P129B071R1_090.ab1   318 
  209    BE403428Ld07P129B01P129B071F1_090.ab1    53 
  225  C BE403428Ld07P129B01P129B071R1_090.ab1   298 
  229    BE403428Ld07P129B01P129B071F1_090.ab1    73 
Contig length: old 720, new 721

Contig length: old 721, new 721
New start: 0