No. words: 1080; after pruning: 1054 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 2 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 1 0.0 5.9 (1,1:367) 358 0.00 0.27 0.27 BE403428Ld10P129B01P129B071F1_084.ab1 2 368 (188) C BE403428Ld10P129B01P129B071R1_084.ab1 (157) 367 1 * Pass: 3 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 0 Gap # merges # failures size 1 1 0 Offset 0 1 Pass 4 Gap Score Pass: 4 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Read equivalence class histogram: 2 1 Chimera merges: Contig 1: 180 nodes 92 str. conn. components Path 1 C BE403428Ld10P129B01P129B071R1_084.ab1 524 225 BE403428Ld10P129B01P129B071F1_084.ab1 68 233 C BE403428Ld10P129B01P129B071R1_084.ab1 292 269 BE403428Ld10P129B01P129B071F1_084.ab1 112 277 C BE403428Ld10P129B01P129B071R1_084.ab1 248 285 BE403428Ld10P129B01P129B071F1_084.ab1 128 297 C BE403428Ld10P129B01P129B071R1_084.ab1 228 317 BE403428Ld10P129B01P129B071F1_084.ab1 160 333 C BE403428Ld10P129B01P129B071R1_084.ab1 192 349 BE403428Ld10P129B01P129B071F1_084.ab1 192 385 C BE403428Ld10P129B01P129B071R1_084.ab1 140 393 BE403428Ld10P129B01P129B071F1_084.ab1 236 401 C BE403428Ld10P129B01P129B071R1_084.ab1 124 417 BE403428Ld10P129B01P129B071F1_084.ab1 260 469 C BE403428Ld10P129B01P129B071R1_084.ab1 56 477 BE403428Ld10P129B01P129B071F1_084.ab1 320 Contig length: old 712, new 713 Contig length: old 713, new 713 New start: 0