No. words: 1208; after pruning: 1182


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.1 (1,1:453)  449  0.00 0.00 0.00  BE403619Ld05P016B01B07R1_019.ab1        1   454 (159)  C BE403619Ld05P016B01B07F1_019.ab1   (141)   454     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  228 nodes

 116 str. conn. components

Path
    1  C BE403619Ld05P016B01B07F1_019.ab1   595 
  190    BE403619Ld05P016B01B07R1_019.ab1    49 
  202  C BE403619Ld05P016B01B07F1_019.ab1   394 
  230    BE403619Ld05P016B01B07R1_019.ab1    89 
  234  C BE403619Ld05P016B01B07F1_019.ab1   362 
  262    BE403619Ld05P016B01B07R1_019.ab1   121 
  302  C BE403619Ld05P016B01B07F1_019.ab1   294 
  314    BE403619Ld05P016B01B07R1_019.ab1   173 
Contig length: old 754, new 754

Contig length: old 754, new 754
New start: 0