No. words: 1185; after pruning: 1145


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 7.7 (1,1:461)  451  0.00 0.00 0.22  BE403619Ld10P016B01B07R1_026.ab1        1   461 (122)  C BE403619Ld10P016B01B07F1_026.ab1   (141)   461     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  230 nodes

 117 str. conn. components

Path
    1  C BE403619Ld10P016B01B07F1_026.ab1   602 
  194    BE403619Ld10P016B01B07R1_026.ab1    53 
  234  C BE403619Ld10P016B01B07F1_026.ab1   369 
  282    BE403619Ld10P016B01B07R1_026.ab1   141 
  286  C BE403619Ld10P016B01B07F1_026.ab1   317 
  294    BE403619Ld10P016B01B07R1_026.ab1   153 
  302  C BE403619Ld10P016B01B07F1_026.ab1   301 
  318    BE403619Ld10P016B01B07R1_026.ab1   177 
  366  C BE403619Ld10P016B01B07F1_026.ab1   237 
  374    BE403619Ld10P016B01B07R1_026.ab1   233 
  538  C BE403619Ld10P016B01B07F1_026.ab1    65 
  546    BE403619Ld10P016B01B07R1_026.ab1   405 
  550  C BE403619Ld10P016B01B07F1_026.ab1    53 
  562    BE403619Ld10P016B01B07R1_026.ab1   421 
Contig length: old 723, new 724

Contig length: old 724, new 724
New start: 0 
S Change at: 682; seg lengths: entry 1, contig 1