No. words: 1564; after pruning: 1538


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.7 (1,1:622)  614  0.00 0.00 0.16  BE403637Ld03P027H06P027H121F1_016.ab1        1   623 (171)  C BE403637Ld03P027H06P027H121R1_016.ab1   (148)   622     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  312 nodes

 158 str. conn. components

Path
    1  C BE403637Ld03P027H06P027H121R1_016.ab1   770 
  188    BE403637Ld03P027H06P027H121F1_016.ab1    40 
  228  C BE403637Ld03P027H06P027H121R1_016.ab1   543 
  236    BE403637Ld03P027H06P027H121F1_016.ab1    88 
  240  C BE403637Ld03P027H06P027H121R1_016.ab1   531 
  256    BE403637Ld03P027H06P027H121F1_016.ab1   108 
  284  C BE403637Ld03P027H06P027H121R1_016.ab1   487 
  312    BE403637Ld03P027H06P027H121F1_016.ab1   164 
Contig length: old 941, new 942

Contig length: old 942, new 942
New start: 0