No. words: 1560; after pruning: 1534


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.9 (1,1:632)  626  0.16 0.00 0.00  BE403637Ld04P027H06P027H121F1_014.ab1        1   633 (157)  C BE403637Ld04P027H06P027H121R1_014.ab1   (137)   633     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  316 nodes

 160 str. conn. components

Path
    1  C BE403637Ld04P027H06P027H121R1_014.ab1   770 
  189    BE403637Ld04P027H06P027H121F1_014.ab1    52 
  209  C BE403637Ld04P027H06P027H121R1_014.ab1   562 
  217    BE403637Ld04P027H06P027H121F1_014.ab1    80 
  229  C BE403637Ld04P027H06P027H121R1_014.ab1   542 
  245    BE403637Ld04P027H06P027H121F1_014.ab1   108 
  285  C BE403637Ld04P027H06P027H121R1_014.ab1   486 
  393    BE403637Ld04P027H06P027H121F1_014.ab1   256 
Contig length: old 927, new 927

Contig length: old 927, new 927
New start: 0