No. words: 1540; after pruning: 1514


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.3 (1,1:632)  616  0.47 0.00 0.16  BE403637Ld10P027H06P027H121F1_002.ab1        1   633 (127)  C BE403637Ld10P027H06P027H121R1_002.ab1   (148)   632     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  308 nodes

 156 str. conn. components

Path
    1  C BE403637Ld10P027H06P027H121R1_002.ab1   780 
  667    BE403637Ld10P027H06P027H121F1_002.ab1   519 
Contig length: old 907, new 908

Contig length: old 908, new 908
New start: 0