No. words: 1168; after pruning: 1142


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.9 (1,1:537)  526  0.00 0.00 0.00  BE403647At01P129C01P129C071F1_012.ab1        1   538 (50)  C BE403647At01P129C01P129C071R1_012.ab1   (42)   538     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  270 nodes

 137 str. conn. components

Path
    1  C BE403647At01P129C01P129C071R1_012.ab1   580 
  106    BE403647At01P129C01P129C071F1_012.ab1    64 
  138  C BE403647At01P129C01P129C071R1_012.ab1   443 
  150    BE403647At01P129C01P129C071F1_012.ab1   108 
  178  C BE403647At01P129C01P129C071R1_012.ab1   403 
  218    BE403647At01P129C01P129C071F1_012.ab1   176 
Contig length: old 630, new 630

Contig length: old 630, new 630
New start: 0