No. words: 1178; after pruning: 1152


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 10.7 (1,1:545)  525  0.37 0.00 0.00  BE403647At02P129C01P129C071F1_010.ab1        1   543 (36)  C BE403647At02P129C01P129C071R1_010.ab1   (53)   546     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  268 nodes

 136 str. conn. components

Path
    1  C BE403647At02P129C01P129C071R1_010.ab1   599 
   62    BE403647At02P129C01P129C071F1_010.ab1     9 
   74  C BE403647At02P129C01P129C071R1_010.ab1   526 
   78    BE403647At02P129C01P129C071F1_010.ab1    25 
   86  C BE403647At02P129C01P129C071R1_010.ab1   514 
   90    BE403647At02P129C01P129C071F1_010.ab1    37 
  129  C BE403647At02P129C01P129C071R1_010.ab1   471 
  133    BE403647At02P129C01P129C071F1_010.ab1    80 
  185  C BE403647At02P129C01P129C071R1_010.ab1   415 
  197    BE403647At02P129C01P129C071F1_010.ab1   144 
Contig length: old 632, new 632

Contig length: old 632, new 632
New start: 0 
S Change at: 58; seg lengths: entry 1, contig 1