No. words: 1561; after pruning: 1535


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.4 (1,1:737)  729  0.00 0.00 0.00  BE403647At02P129D01P129D071F1_080.ab1        1   738 (42)  C BE403647At02P129D01P129D071R1_080.ab1   (43)   738     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  370 nodes

 187 str. conn. components

Path
    1  C BE403647At02P129D01P129D071R1_080.ab1   781 
   47    BE403647At02P129D01P129D071F1_080.ab1     4 
   63  C BE403647At02P129D01P129D071R1_080.ab1   719 
   67    BE403647At02P129D01P129D071F1_080.ab1    24 
   95  C BE403647At02P129D01P129D071R1_080.ab1   687 
   99    BE403647At02P129D01P129D071F1_080.ab1    56 
  111  C BE403647At02P129D01P129D071R1_080.ab1   671 
  115    BE403647At02P129D01P129D071F1_080.ab1    72 
  119  C BE403647At02P129D01P129D071R1_080.ab1   663 
  123    BE403647At02P129D01P129D071F1_080.ab1    80 
  135  C BE403647At02P129D01P129D071R1_080.ab1   647 
  143    BE403647At02P129D01P129D071F1_080.ab1   100 
  155  C BE403647At02P129D01P129D071R1_080.ab1   627 
  175    BE403647At02P129D01P129D071F1_080.ab1   132 
  215  C BE403647At02P129D01P129D071R1_080.ab1   567 
  663    BE403647At02P129D01P129D071F1_080.ab1   620 
  667  C BE403647At02P129D01P129D071R1_080.ab1   115 
  695    BE403647At02P129D01P129D071F1_080.ab1   652 
  699  C BE403647At02P129D01P129D071R1_080.ab1    83 
  719    BE403647At02P129D01P129D071F1_080.ab1   676 
  723  C BE403647At02P129D01P129D071R1_080.ab1    59 
  735    BE403647At02P129D01P129D071F1_080.ab1   692 
  743  C BE403647At02P129D01P129D071R1_080.ab1    39 
  747    BE403647At02P129D01P129D071F1_080.ab1   704 
Contig length: old 823, new 823

Contig length: old 823, new 823
New start: 0