No. words: 1426; after pruning: 1400


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.1 (1,1:566)  531  0.88 0.00 0.35  BE403647Ld13P129C01P129C071F1_075.ab1        1   568 (165)  C BE403647Ld13P129C01P129C071R1_075.ab1   (127)   566     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  266 nodes

 135 str. conn. components

Path
    1  C BE403647Ld13P129C01P129C071R1_075.ab1   693 
  212    BE403647Ld13P129C01P129C071F1_075.ab1    85 
  220  C BE403647Ld13P129C01P129C071R1_075.ab1   474 
  228    BE403647Ld13P129C01P129C071F1_075.ab1   101 
  244  C BE403647Ld13P129C01P129C071R1_075.ab1   450 
  248    BE403647Ld13P129C01P129C071F1_075.ab1   121 
  280  C BE403647Ld13P129C01P129C071R1_075.ab1   414 
  288    BE403647Ld13P129C01P129C071F1_075.ab1   161 
  296  C BE403647Ld13P129C01P129C071R1_075.ab1   398 
  300    BE403647Ld13P129C01P129C071F1_075.ab1   173 
  332  C BE403647Ld13P129C01P129C071R1_075.ab1   362 
  336    BE403647Ld13P129C01P129C071F1_075.ab1   209 
  340  C BE403647Ld13P129C01P129C071R1_075.ab1   354 
  344    BE403647Ld13P129C01P129C071F1_075.ab1   217 
  556  C BE403647Ld13P129C01P129C071R1_075.ab1   138 
  560    BE403647Ld13P129C01P129C071F1_075.ab1   433 
Contig length: old 859, new 860

Contig length: old 860, new 860
New start: 0