No. words: 1181; after pruning: 1155


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 11.4 (1,1:543)  531  0.00 0.00 0.00  BE403647Tu01P129C01P129C071F1_003.ab1        1   543 (38)  C BE403647Tu01P129C01P129C071R1_003.ab1   (56)   544     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  274 nodes

 139 str. conn. components

Path
    1  C BE403647Tu01P129C01P129C071R1_003.ab1   600 
  128    BE403647Tu01P129C01P129C071F1_003.ab1    72 
  136  C BE403647Tu01P129C01P129C071R1_003.ab1   465 
  160    BE403647Tu01P129C01P129C071F1_003.ab1   104 
  200  C BE403647Tu01P129C01P129C071R1_003.ab1   401 
  260    BE403647Tu01P129C01P129C071F1_003.ab1   204 
Contig length: old 637, new 637

Contig length: old 637, new 637
New start: 0