No. words: 1224; after pruning: 1198


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 8.9 (1,1:562)  528  0.00 0.18 0.36  BE403757Sn26P088G01P095D121F1_024.ab1        1   560 (50)  C BE403757Sn26P088G01P095D121R1_024.ab1   (51)   563     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  272 nodes

 138 str. conn. components

Path
    1  C BE403757Sn26P088G01P095D121R1_024.ab1   614 
  397    BE403757Sn26P088G01P095D121F1_024.ab1   345 
  505  C BE403757Sn26P088G01P095D121R1_024.ab1   110 
  513    BE403757Sn26P088G01P095D121F1_024.ab1   461 
  537  C BE403757Sn26P088G01P095D121R1_024.ab1    78 
  541    BE403757Sn26P088G01P095D121F1_024.ab1   489 
  553  C BE403757Sn26P088G01P095D121R1_024.ab1    62 
  569    BE403757Sn26P088G01P095D121F1_024.ab1   517 
  585  C BE403757Sn26P088G01P095D121R1_024.ab1    30 
  589    BE403757Sn26P088G01P095D121F1_024.ab1   537 
Contig length: old 661, new 662

Contig length: old 662, new 662
New start: 0