No. words: 1200; after pruning: 1174


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.6 (1,1:545)  523  0.00 0.18 0.00  BE403757Sn29P088G01P095D121F1_019.ab1        1   546 (56)  C BE403757Sn29P088G01P095D121R1_019.ab1   (51)   547     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  272 nodes

 138 str. conn. components

Path
    1  C BE403757Sn29P088G01P095D121R1_019.ab1   598 
  181    BE403757Sn29P088G01P095D121F1_019.ab1   129 
  229  C BE403757Sn29P088G01P095D121R1_019.ab1   370 
  245    BE403757Sn29P088G01P095D121F1_019.ab1   193 
  269  C BE403757Sn29P088G01P095D121R1_019.ab1   330 
  317    BE403757Sn29P088G01P095D121F1_019.ab1   265 
  369  C BE403757Sn29P088G01P095D121R1_019.ab1   230 
  429    BE403757Sn29P088G01P095D121F1_019.ab1   377 
  473  C BE403757Sn29P088G01P095D121R1_019.ab1   126 
  485    BE403757Sn29P088G01P095D121F1_019.ab1   433 
  537  C BE403757Sn29P088G01P095D121R1_019.ab1    62 
  541    BE403757Sn29P088G01P095D121F1_019.ab1   489 
Contig length: old 654, new 654

Contig length: old 654, new 654
New start: 0