No. words: 1216; after pruning: 1190


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 11.3 (1,1:561)  538  0.00 0.18 0.00  BE403757Sn31P088G01P095D121F1_017.ab1        1   560 (42)  C BE403757Sn31P088G01P095D121R1_017.ab1   (51)   563     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  280 nodes

 142 str. conn. components

Path
    1  C BE403757Sn31P088G01P095D121R1_017.ab1   614 
   85    BE403757Sn31P088G01P095D121F1_017.ab1    33 
   89  C BE403757Sn31P088G01P095D121R1_017.ab1   526 
  101    BE403757Sn31P088G01P095D121F1_017.ab1    49 
  109  C BE403757Sn31P088G01P095D121R1_017.ab1   506 
  113    BE403757Sn31P088G01P095D121F1_017.ab1    61 
  117  C BE403757Sn31P088G01P095D121R1_017.ab1   498 
  125    BE403757Sn31P088G01P095D121F1_017.ab1    73 
  145  C BE403757Sn31P088G01P095D121R1_017.ab1   470 
  157    BE403757Sn31P088G01P095D121F1_017.ab1   105 
  349  C BE403757Sn31P088G01P095D121R1_017.ab1   266 
  377    BE403757Sn31P088G01P095D121F1_017.ab1   325 
  533  C BE403757Sn31P088G01P095D121R1_017.ab1    82 
  537    BE403757Sn31P088G01P095D121F1_017.ab1   485 
Contig length: old 654, new 654

Contig length: old 654, new 654
New start: 0