No. words: 1226; after pruning: 1200


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 10.5 (1,1:563)  538  0.00 0.18 0.00  BE403757Sn32P088G01P095D121F1_018.ab1        1   560 (50)  C BE403757Sn32P088G01P095D121R1_018.ab1   (51)   565     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  280 nodes

 142 str. conn. components

Path
    1  C BE403757Sn32P088G01P095D121R1_018.ab1   616 
  137    BE403757Sn32P088G01P095D121F1_018.ab1    85 
  149  C BE403757Sn32P088G01P095D121R1_018.ab1   468 
  153    BE403757Sn32P088G01P095D121F1_018.ab1   101 
  157  C BE403757Sn32P088G01P095D121R1_018.ab1   460 
  169    BE403757Sn32P088G01P095D121F1_018.ab1   117 
  349  C BE403757Sn32P088G01P095D121R1_018.ab1   268 
  401    BE403757Sn32P088G01P095D121F1_018.ab1   349 
  473  C BE403757Sn32P088G01P095D121R1_018.ab1   144 
  505    BE403757Sn32P088G01P095D121F1_018.ab1   453 
  509  C BE403757Sn32P088G01P095D121R1_018.ab1   108 
  513    BE403757Sn32P088G01P095D121F1_018.ab1   461 
  533  C BE403757Sn32P088G01P095D121R1_018.ab1    84 
  541    BE403757Sn32P088G01P095D121F1_018.ab1   489 
Contig length: old 662, new 662

Contig length: old 662, new 662
New start: 0