No. words: 1199; after pruning: 1173


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.6 (1,1:546)  524  0.00 0.18 0.00  BE403757Ta13P088G01P095D121F1_003.ab1        1   547 (53)  C BE403757Ta13P088G01P095D121R1_003.ab1   (51)   548     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  272 nodes

 138 str. conn. components

Path
    1  C BE403757Ta13P088G01P095D121R1_003.ab1   599 
  445    BE403757Ta13P088G01P095D121F1_003.ab1   393 
  537  C BE403757Ta13P088G01P095D121R1_003.ab1    63 
  541    BE403757Ta13P088G01P095D121F1_003.ab1   489 
Contig length: old 652, new 652

Contig length: old 652, new 652
New start: 0