No. words: 1205; after pruning: 1179


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 7.5 (1,1:563)  516  1.07 0.18 0.18  BE403757Ta15P088G01P095D121F1_001.ab1        1   560 (41)  C BE403757Ta15P088G01P095D121R1_001.ab1   (40)   564     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  262 nodes

 133 str. conn. components

Path
    1  C BE403757Ta15P088G01P095D121R1_001.ab1   604 
  432    BE403757Ta15P088G01P095D121F1_001.ab1   391 
  440  C BE403757Ta15P088G01P095D121R1_001.ab1   165 
  448    BE403757Ta15P088G01P095D121F1_001.ab1   407 
  452  C BE403757Ta15P088G01P095D121R1_001.ab1   153 
  456    BE403757Ta15P088G01P095D121F1_001.ab1   415 
  460  C BE403757Ta15P088G01P095D121R1_001.ab1   145 
  504    BE403757Ta15P088G01P095D121F1_001.ab1   463 
  516  C BE403757Ta15P088G01P095D121R1_001.ab1    89 
  520    BE403757Ta15P088G01P095D121F1_001.ab1   479 
Contig length: old 641, new 642

Contig length: old 642, new 642
New start: 0