No. words: 1214; after pruning: 1188


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 9.6 (1,1:560)  528  0.36 0.18 0.18  BE403757Ta16P088G01P095D121F1_002.ab1        1   560 (42)  C BE403757Ta16P088G01P095D121R1_002.ab1   (51)   561     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  272 nodes

 138 str. conn. components

Path
    1  C BE403757Ta16P088G01P095D121R1_002.ab1   612 
  179    BE403757Ta16P088G01P095D121F1_002.ab1   127 
  367  C BE403757Ta16P088G01P095D121R1_002.ab1   246 
  395    BE403757Ta16P088G01P095D121F1_002.ab1   343 
  531  C BE403757Ta16P088G01P095D121R1_002.ab1    82 
  539    BE403757Ta16P088G01P095D121F1_002.ab1   487 
Contig length: old 653, new 654

Contig length: old 654, new 654
New start: 0