No. words: 1217; after pruning: 1191


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 9.8 (1,1:563)  538  0.00 0.18 0.00  BE403757Ta17P088G01P095D121F1_031.ab1        1   560 (41)  C BE403757Ta17P088G01P095D121R1_031.ab1   (51)   565     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  280 nodes

 142 str. conn. components

Path
    1  C BE403757Ta17P088G01P095D121R1_031.ab1   616 
  181    BE403757Ta17P088G01P095D121F1_031.ab1   129 
  469  C BE403757Ta17P088G01P095D121R1_031.ab1   148 
  493    BE403757Ta17P088G01P095D121F1_031.ab1   441 
  537  C BE403757Ta17P088G01P095D121R1_031.ab1    80 
  541    BE403757Ta17P088G01P095D121F1_031.ab1   489 
Contig length: old 653, new 653

Contig length: old 653, new 653
New start: 0