No. words: 1195; after pruning: 1169


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 10.3 (1,1:540)  505  0.74 0.00 0.19  BE403757Ta18P088G01P095D121F1_032.ab1        1   539 (55)  C BE403757Ta18P088G01P095D121R1_032.ab1   (61)   540     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  260 nodes

 132 str. conn. components

Path
    1  C BE403757Ta18P088G01P095D121R1_032.ab1   601 
  185    BE403757Ta18P088G01P095D121F1_032.ab1   124 
  473  C BE403757Ta18P088G01P095D121R1_032.ab1   129 
  493    BE403757Ta18P088G01P095D121F1_032.ab1   432 
  537  C BE403757Ta18P088G01P095D121R1_032.ab1    65 
  549    BE403757Ta18P088G01P095D121F1_032.ab1   488 
  553  C BE403757Ta18P088G01P095D121R1_032.ab1    49 
  569    BE403757Ta18P088G01P095D121F1_032.ab1   508 
Contig length: old 654, new 655

Contig length: old 655, new 655
New start: 0 
S Change at: 579; seg lengths: entry 1, contig 1
S Change at: 583; seg lengths: entry 3, contig 3
S Change at: 589; seg lengths: entry 1, contig 1