No. words: 1206; after pruning: 1180


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 7.3 (1,1:563)  529  0.00 0.18 0.36  BE403757Ta23P088G01P095D121F1_025.ab1        1   561 (42)  C BE403757Ta23P088G01P095D121R1_025.ab1   (39)   564     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  274 nodes

 139 str. conn. components

Path
    1  C BE403757Ta23P088G01P095D121R1_025.ab1   603 
  385    BE403757Ta23P088G01P095D121F1_025.ab1   345 
  393  C BE403757Ta23P088G01P095D121R1_025.ab1   211 
  433    BE403757Ta23P088G01P095D121F1_025.ab1   393 
  441  C BE403757Ta23P088G01P095D121R1_025.ab1   163 
  449    BE403757Ta23P088G01P095D121F1_025.ab1   409 
  453  C BE403757Ta23P088G01P095D121R1_025.ab1   151 
  485    BE403757Ta23P088G01P095D121F1_025.ab1   445 
  493  C BE403757Ta23P088G01P095D121R1_025.ab1   111 
  501    BE403757Ta23P088G01P095D121F1_025.ab1   461 
  517  C BE403757Ta23P088G01P095D121R1_025.ab1    87 
  529    BE403757Ta23P088G01P095D121F1_025.ab1   489 
  545  C BE403757Ta23P088G01P095D121R1_025.ab1    59 
  553    BE403757Ta23P088G01P095D121F1_025.ab1   513 
  561  C BE403757Ta23P088G01P095D121R1_025.ab1    43 
  569    BE403757Ta23P088G01P095D121F1_025.ab1   529 
  573  C BE403757Ta23P088G01P095D121R1_025.ab1    31 
  577    BE403757Ta23P088G01P095D121F1_025.ab1   537 
Contig length: old 642, new 643

Contig length: old 643, new 643
New start: 0