No. words: 1205; after pruning: 1179


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 9.0 (1,1:561)  533  0.00 0.18 0.18  BE403757Td07P088G01P095D121F1_009.ab1        1   560 (43)  C BE403757Td07P088G01P095D121R1_009.ab1   (40)   562     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  276 nodes

 140 str. conn. components

Path
    1  C BE403757Td07P088G01P095D121R1_009.ab1   602 
  502    BE403757Td07P088G01P095D121F1_009.ab1   461 
  546  C BE403757Td07P088G01P095D121R1_009.ab1    57 
  554    BE403757Td07P088G01P095D121F1_009.ab1   513 
Contig length: old 643, new 644

Contig length: old 644, new 644
New start: 0