No. words: 1214; after pruning: 1188


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.8 (1,1:755)  441  0.44 0.00 0.00  BE404125At02P016C01C07R1_018.ab1      217   674 (0)  C BE404125At02P016C01C07F1_018.ab1   (0)   540    83 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  222 nodes

 113 str. conn. components

Path
    1    BE404125At02P016C01C07R1_018.ab1     1 
  279  C BE404125At02P016C01C07F1_018.ab1   478 
  283    BE404125At02P016C01C07R1_018.ab1   283 
  307  C BE404125At02P016C01C07F1_018.ab1   450 
  315    BE404125At02P016C01C07R1_018.ab1   315 
  339  C BE404125At02P016C01C07F1_018.ab1   418 
  343    BE404125At02P016C01C07R1_018.ab1   343 
  351  C BE404125At02P016C01C07F1_018.ab1   406 
  363    BE404125At02P016C01C07R1_018.ab1   363 
  367  C BE404125At02P016C01C07F1_018.ab1   390 
Contig length: old 756, new 756

Contig length: old 756, new 756
New start: 0