No. words: 1386; after pruning: 1360


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.0 (1,1:751)  488  0.20 0.00 0.00  BE404125Ld01P016C01C07R1_047.ab1        1   503 (0)  C BE404125Ld01P016C01C07F1_047.ab1   (131)   752   250 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1  C BE404125Ld01P016C01C07F1_047.ab1   883 
  139    BE404125Ld01P016C01C07R1_047.ab1     8 
  143  C BE404125Ld01P016C01C07F1_047.ab1   741 
  147    BE404125Ld01P016C01C07R1_047.ab1    16 
  179  C BE404125Ld01P016C01C07F1_047.ab1   705 
  183    BE404125Ld01P016C01C07R1_047.ab1    52 
  211  C BE404125Ld01P016C01C07F1_047.ab1   673 
  215    BE404125Ld01P016C01C07R1_047.ab1    84 
  223  C BE404125Ld01P016C01C07F1_047.ab1   661 
  231    BE404125Ld01P016C01C07R1_047.ab1   100 
  235  C BE404125Ld01P016C01C07F1_047.ab1   649 
  243    BE404125Ld01P016C01C07R1_047.ab1   112 
  319  C BE404125Ld01P016C01C07F1_047.ab1   565 
  327    BE404125Ld01P016C01C07R1_047.ab1   196 
  371  C BE404125Ld01P016C01C07F1_047.ab1   513 
  403    BE404125Ld01P016C01C07R1_047.ab1   272 
  407  C BE404125Ld01P016C01C07F1_047.ab1   477 
  423    BE404125Ld01P016C01C07R1_047.ab1   292 
  427  C BE404125Ld01P016C01C07F1_047.ab1   457 
Contig length: old 883, new 883

Contig length: old 883, new 883
New start: 0