No. words: 1209; after pruning: 1183


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.3 (1,1:465)  449  0.00 0.00 0.00  BE404125Ld03P016C01C07R1_043.ab1        1   466 (148)  C BE404125Ld03P016C01C07F1_043.ab1   (129)   466     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C BE404125Ld03P016C01C07F1_043.ab1   595 
  185    BE404125Ld03P016C01C07R1_043.ab1    56 
  189  C BE404125Ld03P016C01C07F1_043.ab1   407 
  245    BE404125Ld03P016C01C07R1_043.ab1   116 
  253  C BE404125Ld03P016C01C07F1_043.ab1   343 
  289    BE404125Ld03P016C01C07R1_043.ab1   160 
  365  C BE404125Ld03P016C01C07F1_043.ab1   231 
  453    BE404125Ld03P016C01C07R1_043.ab1   324 
Contig length: old 743, new 743

Contig length: old 743, new 743
New start: 0