No. words: 1145; after pruning: 1119


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.5 (1,1:431)  406  0.00 0.00 0.23  BE404125Ld04P016C01C07R1_041.ab1        1   432 (149)  C BE404125Ld04P016C01C07F1_041.ab1   (133)   431     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  216 nodes

 110 str. conn. components

Path
    1  C BE404125Ld04P016C01C07F1_041.ab1   564 
  153    BE404125Ld04P016C01C07R1_041.ab1    20 
  165  C BE404125Ld04P016C01C07F1_041.ab1   400 
  169    BE404125Ld04P016C01C07R1_041.ab1    36 
  173  C BE404125Ld04P016C01C07F1_041.ab1   392 
  321    BE404125Ld04P016C01C07R1_041.ab1   188 
Contig length: old 713, new 714

Contig length: old 714, new 714
New start: 0