No. words: 1183; after pruning: 1157


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.4 (1,1:424)  403  0.00 0.00 0.00  BE404125Ld10P016C01C07R1_046.ab1        1   425 (149)  C BE404125Ld10P016C01C07F1_046.ab1   (184)   425     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  214 nodes

 109 str. conn. components

Path
    1  C BE404125Ld10P016C01C07F1_046.ab1   609 
  238    BE404125Ld10P016C01C07R1_046.ab1    54 
  242  C BE404125Ld10P016C01C07F1_046.ab1   368 
  326    BE404125Ld10P016C01C07R1_046.ab1   142 
  330  C BE404125Ld10P016C01C07F1_046.ab1   280 
  366    BE404125Ld10P016C01C07R1_046.ab1   182 
Contig length: old 758, new 758

Contig length: old 758, new 758
New start: 0