No. words: 1371; after pruning: 1345


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.5 (1,1:747)  602  0.32 0.00 0.00  BE404125Tu02P016C01C07R1_022.ab1      110   732 (0)  C BE404125Tu02P016C01C07F1_022.ab1   (0)   639    17 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  306 nodes

 155 str. conn. components

Path
    1    BE404125Tu02P016C01C07R1_022.ab1     1 
  319  C BE404125Tu02P016C01C07F1_022.ab1   430 
  339    BE404125Tu02P016C01C07R1_022.ab1   339 
  347  C BE404125Tu02P016C01C07F1_022.ab1   402 
  599    BE404125Tu02P016C01C07R1_022.ab1   599 
  603  C BE404125Tu02P016C01C07F1_022.ab1   146 
  623    BE404125Tu02P016C01C07R1_022.ab1   623 
  627  C BE404125Tu02P016C01C07F1_022.ab1   122 
  655    BE404125Tu02P016C01C07R1_022.ab1   655 
  663  C BE404125Tu02P016C01C07F1_022.ab1    86 
Contig length: old 748, new 748

Contig length: old 748, new 748
New start: 0