No. words: 1540; after pruning: 1514


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.6 (1,1:731)  709  0.27 0.00 0.14  BE404374At02P129F01P129G071F1_017.ab1        1   732 (36)  C BE404374At02P129F01P129G071R1_017.ab1   (41)   731     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  358 nodes

 181 str. conn. components

Path
    1  C BE404374At02P129F01P129G071R1_017.ab1   772 
   57    BE404374At02P129F01P129G071F1_017.ab1    16 
   65  C BE404374At02P129F01P129G071R1_017.ab1   708 
  109    BE404374At02P129F01P129G071F1_017.ab1    68 
  121  C BE404374At02P129F01P129G071R1_017.ab1   652 
  177    BE404374At02P129F01P129G071F1_017.ab1   136 
  329  C BE404374At02P129F01P129G071R1_017.ab1   444 
  349    BE404374At02P129F01P129G071F1_017.ab1   308 
  369  C BE404374At02P129F01P129G071R1_017.ab1   404 
  377    BE404374At02P129F01P129G071F1_017.ab1   336 
  437  C BE404374At02P129F01P129G071R1_017.ab1   336 
  449    BE404374At02P129F01P129G071F1_017.ab1   408 
  461  C BE404374At02P129F01P129G071R1_017.ab1   312 
  489    BE404374At02P129F01P129G071F1_017.ab1   448 
  517  C BE404374At02P129F01P129G071R1_017.ab1   256 
  521    BE404374At02P129F01P129G071F1_017.ab1   480 
  549  C BE404374At02P129F01P129G071R1_017.ab1   224 
  557    BE404374At02P129F01P129G071F1_017.ab1   516 
  653  C BE404374At02P129F01P129G071R1_017.ab1   120 
  661    BE404374At02P129F01P129G071F1_017.ab1   620 
  764  C BE404374At02P129F01P129G071R1_017.ab1    10 
  768    BE404374At02P129F01P129G071F1_017.ab1   727 
Contig length: old 808, new 809

Contig length: old 809, new 809
New start: 0