No. words: 1192; after pruning: 1166


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 8.7 (1,1:467)  449  0.00 0.43 0.00  BE404374Ld04P129E01P129F071F1_016.ab1        4   467 (128)  C BE404374Ld04P129E01P129F071R1_016.ab1   (131)   466     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  226 nodes

 115 str. conn. components

Path
    1  C BE404374Ld04P129E01P129F071R1_016.ab1   597 
  284    BE404374Ld04P129E01P129F071F1_016.ab1   154 
  340  C BE404374Ld04P129E01P129F071R1_016.ab1   258 
  348    BE404374Ld04P129E01P129F071F1_016.ab1   218 
  368  C BE404374Ld04P129E01P129F071R1_016.ab1   230 
  376    BE404374Ld04P129E01P129F071F1_016.ab1   246 
  432  C BE404374Ld04P129E01P129F071R1_016.ab1   166 
  448    BE404374Ld04P129E01P129F071F1_016.ab1   318 
Contig length: old 724, new 725

Contig length: old 725, new 725
New start: 0