No. words: 1186; after pruning: 1160


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.7 (1,1:454)  442  0.22 0.22 0.00  BE404374Ld05P129E01P129F071F1_014.ab1        1   455 (128)  C BE404374Ld05P129E01P129F071R1_014.ab1   (147)   456     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  220 nodes

 112 str. conn. components

Path
    1  C BE404374Ld05P129E01P129F071R1_014.ab1   603 
  210    BE404374Ld05P129E01P129F071F1_014.ab1    62 
  218  C BE404374Ld05P129E01P129F071R1_014.ab1   386 
  254    BE404374Ld05P129E01P129F071F1_014.ab1   106 
  266  C BE404374Ld05P129E01P129F071R1_014.ab1   338 
  286    BE404374Ld05P129E01P129F071F1_014.ab1   138 
  378  C BE404374Ld05P129E01P129F071R1_014.ab1   226 
  382    BE404374Ld05P129E01P129F071F1_014.ab1   234 
Contig length: old 731, new 731

Contig length: old 731, new 731
New start: 0