No. words: 1255; after pruning: 1229


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.8 (1,1:451)  439  0.22 0.22 0.00  BE404374Ld06P129E01P129F071F1_067.ab1        1   452 (190)  C BE404374Ld06P129E01P129F071R1_067.ab1   (160)   453     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  220 nodes

 112 str. conn. components

Path
    1  C BE404374Ld06P129E01P129F071R1_067.ab1   613 
  184    BE404374Ld06P129E01P129F071F1_067.ab1    23 
  188  C BE404374Ld06P129E01P129F071R1_067.ab1   426 
  219    BE404374Ld06P129E01P129F071F1_067.ab1    58 
  235  C BE404374Ld06P129E01P129F071R1_067.ab1   379 
  259    BE404374Ld06P129E01P129F071F1_067.ab1    98 
  275  C BE404374Ld06P129E01P129F071R1_067.ab1   339 
  279    BE404374Ld06P129E01P129F071F1_067.ab1   118 
  283  C BE404374Ld06P129E01P129F071R1_067.ab1   331 
  299    BE404374Ld06P129E01P129F071F1_067.ab1   138 
  323  C BE404374Ld06P129E01P129F071R1_067.ab1   291 
  331    BE404374Ld06P129E01P129F071F1_067.ab1   170 
  363  C BE404374Ld06P129E01P129F071R1_067.ab1   251 
  367    BE404374Ld06P129E01P129F071F1_067.ab1   206 
  515  C BE404374Ld06P129E01P129F071R1_067.ab1    99 
  527    BE404374Ld06P129E01P129F071F1_067.ab1   366 
Contig length: old 803, new 803

Contig length: old 803, new 803
New start: 0