No. words: 1239; after pruning: 1213


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.7 (1,1:454)  443  0.00 0.22 0.00  BE404374Ld11P129E01P129F071F1_074.ab1        2   455 (178)  C BE404374Ld11P129E01P129F071R1_074.ab1   (151)   455     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  226 nodes

 115 str. conn. components

Path
    1  C BE404374Ld11P129E01P129F071R1_074.ab1   606 
  192    BE404374Ld11P129E01P129F071F1_074.ab1    41 
  196  C BE404374Ld11P129E01P129F071R1_074.ab1   411 
  228    BE404374Ld11P129E01P129F071F1_074.ab1    77 
  240  C BE404374Ld11P129E01P129F071R1_074.ab1   367 
  296    BE404374Ld11P129E01P129F071F1_074.ab1   145 
  316  C BE404374Ld11P129E01P129F071R1_074.ab1   291 
  324    BE404374Ld11P129E01P129F071F1_074.ab1   173 
  368  C BE404374Ld11P129E01P129F071R1_074.ab1   239 
  388    BE404374Ld11P129E01P129F071F1_074.ab1   237 
  432  C BE404374Ld11P129E01P129F071R1_074.ab1   175 
  440    BE404374Ld11P129E01P129F071F1_074.ab1   289 
  448  C BE404374Ld11P129E01P129F071R1_074.ab1   159 
  460    BE404374Ld11P129E01P129F071F1_074.ab1   309 
  476  C BE404374Ld11P129E01P129F071R1_074.ab1   131 
  488    BE404374Ld11P129E01P129F071F1_074.ab1   337 
  544  C BE404374Ld11P129E01P129F071R1_074.ab1    63 
  552    BE404374Ld11P129E01P129F071F1_074.ab1   401 
Contig length: old 784, new 784

Contig length: old 784, new 784
New start: 0