No. words: 1238; after pruning: 1212


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.4 (1,1:447)  431  0.67 0.22 0.00  BE404374Ld15P129E01P129F071F1_066.ab1        1   448 (186)  C BE404374Ld15P129E01P129F071R1_066.ab1   (155)   449     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  216 nodes

 110 str. conn. components

Path
    1  C BE404374Ld15P129E01P129F071R1_066.ab1   604 
  176    BE404374Ld15P129E01P129F071F1_066.ab1    20 
  444  C BE404374Ld15P129E01P129F071R1_066.ab1   161 
  448    BE404374Ld15P129E01P129F071F1_066.ab1   292 
Contig length: old 790, new 790

Contig length: old 790, new 790
New start: 0