No. words: 1422; after pruning: 1396


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.9 (1,1:675)  659  0.00 0.00 0.15  BE404374Sn24P146B02P129G071F1_090.ab1        1   676 (28)  C BE404374Sn24P146B02P129G071R1_090.ab1   (43)   675     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  336 nodes

 170 str. conn. components

Path
    1  C BE404374Sn24P146B02P129G071R1_090.ab1   718 
   67    BE404374Sn24P146B02P129G071F1_090.ab1    24 
   83  C BE404374Sn24P146B02P129G071R1_090.ab1   636 
   91    BE404374Sn24P146B02P129G071F1_090.ab1    48 
  119  C BE404374Sn24P146B02P129G071R1_090.ab1   600 
  455    BE404374Sn24P146B02P129G071F1_090.ab1   412 
  479  C BE404374Sn24P146B02P129G071R1_090.ab1   240 
  615    BE404374Sn24P146B02P129G071F1_090.ab1   572 
  623  C BE404374Sn24P146B02P129G071R1_090.ab1    96 
  643    BE404374Sn24P146B02P129G071F1_090.ab1   600 
  647  C BE404374Sn24P146B02P129G071R1_090.ab1    72 
  699    BE404374Sn24P146B02P129G071F1_090.ab1   656 
Contig length: old 746, new 747

Contig length: old 747, new 747
New start: 0