No. words: 1452; after pruning: 1412


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.8 (1,1:776)  660  0.30 0.00 0.00  BE404374Sn25P129E01P146A031F1_018.ab1       78   752 (0)  C BE404374Sn25P129E01P146A031R1_018.ab1   (0)   700    26 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  334 nodes

 169 str. conn. components

Path
    1    BE404374Sn25P129E01P146A031F1_018.ab1     1 
  377  C BE404374Sn25P129E01P146A031R1_018.ab1   401 
  385    BE404374Sn25P129E01P146A031F1_018.ab1   385 
  397  C BE404374Sn25P129E01P146A031R1_018.ab1   381 
  405    BE404374Sn25P129E01P146A031F1_018.ab1   405 
  409  C BE404374Sn25P129E01P146A031R1_018.ab1   369 
  417    BE404374Sn25P129E01P146A031F1_018.ab1   417 
  433  C BE404374Sn25P129E01P146A031R1_018.ab1   345 
  441    BE404374Sn25P129E01P146A031F1_018.ab1   441 
  445  C BE404374Sn25P129E01P146A031R1_018.ab1   333 
  449    BE404374Sn25P129E01P146A031F1_018.ab1   449 
  477  C BE404374Sn25P129E01P146A031R1_018.ab1   301 
  485    BE404374Sn25P129E01P146A031F1_018.ab1   485 
  497  C BE404374Sn25P129E01P146A031R1_018.ab1   281 
  501    BE404374Sn25P129E01P146A031F1_018.ab1   501 
  525  C BE404374Sn25P129E01P146A031R1_018.ab1   253 
  575    BE404374Sn25P129E01P146A031F1_018.ab1   575 
  591  C BE404374Sn25P129E01P146A031R1_018.ab1   187 
  659    BE404374Sn25P129E01P146A031F1_018.ab1   659 
  663  C BE404374Sn25P129E01P146A031R1_018.ab1   115 
Contig length: old 777, new 777

Contig length: old 777, new 777
New start: 0