No. words: 1227; after pruning: 1131


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.8 (1,1:652)  500  1.14 0.19 0.00  BE404374Sn26P146F02P129G071F1_002.ab1        1   525 (0)  C BE404374Sn26P146F02P129G071R1_002.ab1   (48)   654   129 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C BE404374Sn26P146F02P129G071R1_002.ab1   702 
   58    BE404374Sn26P146F02P129G071F1_002.ab1     9 
  102  C BE404374Sn26P146F02P129G071R1_002.ab1   601 
  106    BE404374Sn26P146F02P129G071F1_002.ab1    57 
  110  C BE404374Sn26P146F02P129G071R1_002.ab1   593 
  122    BE404374Sn26P146F02P129G071F1_002.ab1    73 
  131  C BE404374Sn26P146F02P129G071R1_002.ab1   572 
  139    BE404374Sn26P146F02P129G071F1_002.ab1    90 
  155  C BE404374Sn26P146F02P129G071R1_002.ab1   548 
  163    BE404374Sn26P146F02P129G071F1_002.ab1   114 
  175  C BE404374Sn26P146F02P129G071R1_002.ab1   528 
  179    BE404374Sn26P146F02P129G071F1_002.ab1   130 
  187  C BE404374Sn26P146F02P129G071R1_002.ab1   516 
  191    BE404374Sn26P146F02P129G071F1_002.ab1   142 
  203  C BE404374Sn26P146F02P129G071R1_002.ab1   500 
  211    BE404374Sn26P146F02P129G071F1_002.ab1   162 
  223  C BE404374Sn26P146F02P129G071R1_002.ab1   480 
  227    BE404374Sn26P146F02P129G071F1_002.ab1   178 
  244  C BE404374Sn26P146F02P129G071R1_002.ab1   459 
  252    BE404374Sn26P146F02P129G071F1_002.ab1   203 
  268  C BE404374Sn26P146F02P129G071R1_002.ab1   435 
  312    BE404374Sn26P146F02P129G071F1_002.ab1   263 
  316  C BE404374Sn26P146F02P129G071R1_002.ab1   387 
  324    BE404374Sn26P146F02P129G071F1_002.ab1   275 
  336  C BE404374Sn26P146F02P129G071R1_002.ab1   367 
  352    BE404374Sn26P146F02P129G071F1_002.ab1   303 
  372  C BE404374Sn26P146F02P129G071R1_002.ab1   331 
  443    BE404374Sn26P146F02P129G071F1_002.ab1   394 
  455  C BE404374Sn26P146F02P129G071R1_002.ab1   248 
  483    BE404374Sn26P146F02P129G071F1_002.ab1   434 
  544  C BE404374Sn26P146F02P129G071R1_002.ab1   159 
Contig length: old 702, new 702

Contig length: old 702, new 702
New start: 0