No. words: 1404; after pruning: 1378


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.3 (1,1:649)  629  0.00 0.00 0.31  BE404374Sn30P146B02P129G071F1_084.ab1        1   651 (49)  C BE404374Sn30P146B02P129G071R1_084.ab1   (55)   649     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  322 nodes

 163 str. conn. components

Path
    1  C BE404374Sn30P146B02P129G071R1_084.ab1   704 
   75    BE404374Sn30P146B02P129G071F1_084.ab1    20 
  123  C BE404374Sn30P146B02P129G071R1_084.ab1   582 
  295    BE404374Sn30P146B02P129G071F1_084.ab1   240 
  303  C BE404374Sn30P146B02P129G071R1_084.ab1   402 
  411    BE404374Sn30P146B02P129G071F1_084.ab1   356 
  419  C BE404374Sn30P146B02P129G071R1_084.ab1   286 
  423    BE404374Sn30P146B02P129G071F1_084.ab1   368 
  435  C BE404374Sn30P146B02P129G071R1_084.ab1   270 
  455    BE404374Sn30P146B02P129G071F1_084.ab1   400 
  483  C BE404374Sn30P146B02P129G071R1_084.ab1   222 
  563    BE404374Sn30P146B02P129G071F1_084.ab1   508 
  571  C BE404374Sn30P146B02P129G071R1_084.ab1   134 
  607    BE404374Sn30P146B02P129G071F1_084.ab1   552 
  631  C BE404374Sn30P146B02P129G071R1_084.ab1    74 
  647    BE404374Sn30P146B02P129G071F1_084.ab1   592 
  651  C BE404374Sn30P146B02P129G071R1_084.ab1    54 
  675    BE404374Sn30P146B02P129G071F1_084.ab1   620 
  684  C BE404374Sn30P146B02P129G071R1_084.ab1    22 
  696    BE404374Sn30P146B02P129G071F1_084.ab1   641 
Contig length: old 754, new 755

Contig length: old 755, new 755
New start: 0